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| clHeightGLIWeibullMortality (clSimManager *p_oSimManager) |
| Constructor.
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| ~clHeightGLIWeibullMortality () |
| Destructor.
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void | DoShellSetup (xercesc::DOMDocument *p_oDoc) |
| Calls GetTreeDataMemberCodes(), then ReadParameterFileData().
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deadCode | DoMort (clTree *p_oTree, const float &fDbh, const short int &iSpecies) |
| Calculates mortality according to the equation above.
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| clMortalityBase (clSimManager *p_oSimManager) |
| Constructor.
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virtual | ~clMortalityBase () |
| Destructor.
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void | Action () |
| Performs mortality calculations.
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clMortalityOrg * | GetMortOrg () |
| Gets the mortality org object.
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void | RegisterTreeDataMembers () |
| Triggers the mortality data member registrations.
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short int | GetNewTreeInts () |
| Overridden from clBehaviorBase.
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bool | UsesThisMortality (short int iSp, short int iTp) |
| Whether or not a species/type combo uses this mortality object.
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virtual void | PreMortCalcs (clTreePopulation *p_oPop) |
| Performs calculations before any trees have been killed.
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virtual float | GetBehaviorVersion () |
| Gets the behavior version number.
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| clBehaviorBase (clSimManager *p_oSimManager) |
| Constructor.
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virtual | ~clBehaviorBase () |
| Destructor.
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virtual short int | ValidateVersionNumber (float fTestVersion) |
| Makes sure that the version number of a file passed is between the minimum and current version numbers.
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virtual void | SetSpeciesTypeCombos (short int iNumCombos, stcSpeciesTypeCombo *p_whatCombos) |
| Sets the species/type combos for a behavior.
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virtual void | SetNameData (char *cNameString) |
| Sets the string for the parameter file behavior.
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virtual short int | GetNewTreeFloats () |
| Gets the number of new tree float data members this behavior wants to register.
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virtual short int | GetNewTreeChars () |
| Gets the number of new tree character data members this behavior wants to register.
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virtual short int | GetNewTreeBools () |
| Gets the number of new tree bool data members this behavior wants to register.
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virtual short int | GetNumSpeciesTypeCombos () |
| Gets the number of species/type combos to which this behavior applies.
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virtual short int | GetNumBehaviorSpecies () |
| Gets the number of unique tree species to which this behavior applies.
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struct stcSpeciesTypeCombo | GetSpeciesTypeCombo (short int iIndex) |
| Gets one of this behavior's type/species combos.
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virtual short int | GetBehaviorSpecies (short int iIndex) |
| Gets one of the behavior's species.
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short int | GetBehaviorListNumber () |
| Gets the behavior list number for this behavior, which differentiates between multiple copies of the behavior in the behavior list.
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void | SetBehaviorListNumber (short int iNumber) |
| Sets the behavior list number for this behavior, which differentiates between multiple copies of the behavior in the behavior list.
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virtual DOMElement * | GetParentParametersElement (xercesc::DOMDocument *p_oDoc) |
| Formats the string for species/types query.
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| clWorkerBase (clSimManager *p_oSimManager) |
| Constructor.
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virtual | ~clWorkerBase () |
| Destructor.
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char * | GetName () |
| Gets the object's namestring.
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void | DoObjectSetup (xercesc::DOMDocument *p_oDoc, fileType iFileType) |
| Triggers the setup process.
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virtual void | TimestepCleanup () |
| Performs any necessary cleanup operations at the end of a timestep.
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virtual void | EndOfRunCleanup () |
| Performs any necessary cleanup operations at the end of a run.
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virtual void | DoCommand (char *cCommand, char *cArguments) |
| If a behavior has registered a command line command with the sim manager, this allows it to be called.
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short int ** | mp_iLightCodes |
| Return codes for the "Light" tree float data member variable.
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short int ** | mp_iHeightCodes |
| Return codes for the "Height" tree float data member variable.
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short int ** | mp_iBrowsedCodes |
| Return codes for the "Browsed" tree bool data member variable.
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float * | mp_fMaxMort |
| Max mortality - sized number of behavior species.
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float * | mp_fA |
| Mortality "a" parameter - sized number of behavior species.
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float * | mp_fB |
| Mortality "b" parameter - sized number of behavior species.
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float * | mp_fC |
| Mortality "c" parameter - sized number of behavior species.
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float * | mp_fD |
| Mortality "d" parameter - sized number of behavior species.
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float * | mp_fBrowsedMaxMort |
| Browsed max mortality - sized number of behavior species.
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float * | mp_fBrowsedA |
| Browsed "a" parameter - sized number of behavior species.
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float * | mp_fBrowsedB |
| Browsed "b" parameter - sized number of behavior species.
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float * | mp_fBrowsedC |
| Browsed "c" parameter - sized number of behavior species.
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float * | mp_fBrowsedD |
| Browsed "d" parameter - sized number of behavior species.
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int * | mp_iIndexes |
| To help access the other arrays.
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float | m_fYearsPerTimestep |
| Number of years per timestep - for converting probabilities for multi- year timesteps.
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short int | m_iNumTotalSpecies |
| Keep a copy for the constructor.
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bool | m_bHooked |
| Whether or not this shell object is hooked to clMortalityOrg.
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bool ** | mp_bUsesThisMortality |
| 2D array, species by type, of whether or not this mortality shell applies to a given species/type combo.
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short int | m_iNumSpeciesTypeCombos |
| How many type/species combos a behavior will act on.
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short int | m_iNumBehaviorSpecies |
| How many distinct species are in the combo list - important for filling species-specific values from parameter file.
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short int * | mp_iWhatSpecies |
| List of distinct species - for filling species-specific values from parameter file.
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stcSpeciesTypeCombo * | mp_whatSpeciesTypeCombos |
| Array of species/type combos that the behavior will act on.
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short int | m_iNewTreeInts |
| The number of new tree integer data members this behavior wants to add.
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short int | m_iNewTreeFloats |
| The number of new tree float data members this behavior wants to add.
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short int | m_iNewTreeChars |
| The number of new tree character data members this behavior wants to add.
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short int | m_iNewTreeBools |
| The number of new tree boolean data members this behavior wants to add.
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short int | m_iBehaviorListNumber |
| The number of this behavior in the behavior list, to differentiate between possible multiple copies of this behavior.
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float | m_fVersionNumber |
| Version number - this will be rounded to 2 digits after the decimal place.
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std::string | m_sXMLRoot |
| XML root that encloses the parameters for this behavior.
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float | m_fMinimumVersionNumber |
| Minimum version number - this behavior will run parameter data for a file marked between this number and the current version number, inclusive.
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char | m_cNameString [MAX_NAMESTRING_SIZE] |
| Object's identifying namestring.
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int * | mp_iAllowedFileTypes |
| List of the input file types this object can handle.
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int | m_iNumAllowedTypes |
| Number of input file types this object can handle.
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Height-GLI Weibull Mortality - Version 2.0.
This evaluates mortality according to a weibull function of tree height and GLI.
The equation used in this behavior is:
p = Mmax * exp(-a * H b - c * GLI d) where
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p = annual probability of mortality
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Mmax = max mortality parameter
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a, b, c, d = parameters
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H = tree height in meters
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GLI, between 0 and 100
If browsing has been implemented (class clRandomBrowse), then this will attempt to implement a second set of parameters for when trees are browsed. Lack of the browse behavior will cause use of the unbrowsed parameters only. A mix of browse applied and unapplied can be used; however, there must be parameters for all the same species for browsed, even if they're not all used.
This class's namestring is "height gli weibull mortshell". The parameter file call string is "HeightGLIWeibullMortality".
Copyright 2011 Charles D. Canham.
- Author
- Lora E. Murphy
Edit history:
--------------—
October 20, 2011 - Wiped the slate clean for SORTIE 7.0 (LEM)